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Quantitative function and algorithm for community detection in bipartite networks 期刊论文
INFORMATION SCIENCES, 2016, 卷号: 367, 页码: 874-889
作者:  Li, Zhenping;  Wang, Rui-Sheng;  Zhang, Shihua;  Zhang, Xiang-Sun
收藏  |  浏览/下载:160/0  |  提交时间:2018/07/30
Bipartite network  Community  Quantitative function  Integer programming  Label propagation algorithm  
A unified computational model for revealing and predicting subtle subtypes of cancers 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: 1
作者:  Ren,Xianwen;  Wang,Yong;  Wang,Jiguang;  Zhang,Xiang-Sun
收藏  |  浏览/下载:140/0  |  提交时间:2018/07/30
Class discovery  Class prediction  Quadratic programming  Cancer  
Detecting and analyzing differentially activated pathways in brain regions of Alzheimer's disease patients 期刊论文
MOLECULAR BIOSYSTEMS, 2011, 卷号: 7, 期号: 5, 页码: 1441-1452
作者:  Liu, Zhi-Ping;  Wang, Yong;  Zhang, Xiang-Sun;  Xia, Weiming;  Chen, Luonan
收藏  |  浏览/下载:133/0  |  提交时间:2018/07/30
Self-organizing map of complex networks for community detection 期刊论文
JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY, 2010, 卷号: 23, 期号: 5, 页码: 931-941
作者:  Li, Zhenping;  Wang, Ruisheng;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载:97/0  |  提交时间:2018/07/30
Community detection  complex network  neural networks  self-organizing map  
SANA: an algorithm for sequential and non-sequential protein structure alignment 期刊论文
AMINO ACIDS, 2010, 卷号: 39, 期号: 2, 页码: 417-425
作者:  Wang, Lin;  Wu, Ling-Yun;  Wang, Yong;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载:153/0  |  提交时间:2018/07/30
Protein structure alignment  Fold comparison  Circular permutation  Functional sites  
selforganizingmapofcomplexnetworksforcommunitydetection 期刊论文
journalofsystemsscienceandcomplexity, 2010, 卷号: 000, 期号: 005, 页码: 931
作者:  Li Zhenping;  Wang Ruisheng;  Zhang Xiangsun;  Chen Luonan
收藏  |  浏览/下载:116/0  |  提交时间:2020/01/10
Exploring the constrained maximum edge-weight connected graph problem 期刊论文
ACTA MATHEMATICAE APPLICATAE SINICA-ENGLISH SERIES, 2009, 卷号: 25, 期号: 4, 页码: 697-708
作者:  Li, Zhen-ping;  Zhang, Shi-hua;  Zhang, Xiang-Sun;  Chen, Luo-nan
收藏  |  浏览/下载:122/0  |  提交时间:2018/07/30
connected subgraph  integer linear programming model  network flow  constraint Steiner network  maximum edge weight, heuristic algorithm  
Self-organizing map approaches for the haplotype assembly problem 期刊论文
MATHEMATICS AND COMPUTERS IN SIMULATION, 2009, 卷号: 79, 期号: 10, 页码: 3026-3037
作者:  Wu, Ling-Yun;  Li, Zhenping;  Wang, Rui-Sheng;  Zhang, Xiang-Sun;  Chen, Luonan
收藏  |  浏览/下载:138/0  |  提交时间:2018/07/30
SNP  Haplotype assembly  Minimum error correction  Self-organizing maps  Neural network  
Modeling post-transcriptional regulation activity of small non-coding RNAs in Escherichia coli 期刊论文
BMC Bioinformatics, 2009, 卷号: 10, 期号: Suppl 4
作者:  Wang,Rui-Sheng;  Jin,Guangxu;  Zhang,Xiang-Sun;  Chen,Luonan
收藏  |  浏览/下载:107/0  |  提交时间:2018/07/30
A hybrid graph-theoretic method for mining overlapping functional modules in large sparse protein interaction networks 期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2009, 卷号: 3, 期号: 1, 页码: 68-84
作者:  Zhang, Shihua;  Liu, Hong-Wei;  Ning, Xue-Mei;  Zhang, Xiang-Sun
收藏  |  浏览/下载:200/0  |  提交时间:2018/07/30
PPI  protein-protein interaction network  network clustering  LGT  line graph transformation  protein complexes  functional modules  data mining  bioinformatics