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中国科学院数学与系统科学研究院机构知识库
KMS Of Academy of mathematics and systems sciences, CAS
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NeuralEE: A GPU-Accelerated Elastic Embedding Dimensionality Reduction Method for Visualizing Large-Scale scRNA-Seq Data
期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 8
Authors:
Xiong, Jiankang
;
Gong, Fuzhou
;
Wan, Lin
;
Ma, Liang
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View/Download:118/0
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Submit date:2021/01/14
single-cell RNA sequencing
elastic embedding
neural networks
large-scale
stochastic optimization
parametric models
generalizable models
SUFFICIENT DIMENSION REDUCTION UNDER DIMENSION-REDUCTION-BASED IMPUTATION WITH PREDICTORS MISSING AT RANDOM
期刊论文
STATISTICA SINICA, 2019, 卷号: 29, 期号: 4, 页码: 1751-1778
Authors:
Yang, Xiaojie
;
Wang, Qihua
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View/Download:214/0
  |  
Submit date:2020/01/10
Kernel imputation
missing at random
missing predictors
sliced inverse regression
sufficient dimension reduction
DensityPath: an algorithm to visualize and reconstruct cell state-transition path on density landscape for single-cell RNA sequencing data
期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 15, 页码: 2593-2601
Authors:
Chen, Ziwei
;
An, Shaokun
;
Bai, Xiangqi
;
Gong, Fuzhou
;
Ma, Liang
;
Wan, Lin
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View/Download:147/0
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Submit date:2020/01/10
TSEE: an elastic embedding method to visualize the dynamic gene expression patterns of time series single-cell RNA sequencing data
期刊论文
BMC GENOMICS, 2019, 卷号: 20, 页码: 16
Authors:
An, Shaokun
;
Ma, Liang
;
Wan, Lin
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View/Download:137/0
  |  
Submit date:2019/10/28
Nonlinear dimensionality reduction
Elastic embedding
Visualization
Single-cell RNA sequencing
Time series
Cell fate decisions
Gene expression pattern
Oscillation
In-group proportion
Unsupervised band selection based on artificial bee colony algorithm for hyperspectral image classification
期刊论文
APPLIED SOFT COMPUTING, 2019, 卷号: 75, 页码: 428-440
Authors:
Xie, Fuding
;
Li, Fangfei
;
Lei, Cunkuan
;
Yang, Jun
;
Zhang, Yong
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View/Download:125/0
  |  
Submit date:2019/03/05
Hyperspectral image
Band selection
ABC algorithm
Subspace decomposition
Dimensionality reduction
Prediction of subcellular location of apoptosis proteins by incorporating PsePSSM and DCCA coefficient based on LFDA dimensionality reduction
期刊论文
BMC Genomics, 2018, 卷号: 19, 期号: 1
Authors:
Yu,Bin
;
Li,Shan
;
Qiu,Wenying
;
Wang,Minghui
;
Du,Junwei
;
Zhang,Yusen
;
Chen,Xing
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View/Download:131/0
  |  
Submit date:2018/07/30
Apoptosis proteins
Subcellular localization
Pseudo-position specific scoring matrix
Detrended cross-correlation analysis coefficient
Local fisher discriminant analysis
Support vector machine
Supervised Polarimetric SAR Image Classification Using Tensor Local Discriminant Embedding
期刊论文
IEEE TRANSACTIONS ON IMAGE PROCESSING, 2018, 卷号: 27, 期号: 6, 页码: 2966-2979
Authors:
Huang, Xiayuan
;
Qiao, Hong
;
Zhang, Bo
;
Nie, Xiangli
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View/Download:220/0
  |  
Submit date:2018/07/30
Land cover classification
dimensionality reduction
feature extraction
spatial information
polarimetric signature
tensor local discriminant embedding
PloSAR image
Variable screening for ultrahigh dimensional heterogeneous data via conditional quantile correlations
期刊论文
JOURNAL OF MULTIVARIATE ANALYSIS, 2018, 卷号: 165, 页码: 1-13
Authors:
Zhang, Shucong
;
Zhou, Yong
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View/Download:120/0
  |  
Submit date:2018/07/30
Conditional quantile correlation
Conditional quantile screening
Ultrahigh dimensionality
Varying coefficient models
Local Discriminant Canonical Correlation Analysis for Supervised PolSAR Image Classification
期刊论文
IEEE GEOSCIENCE AND REMOTE SENSING LETTERS, 2017, 卷号: 14, 期号: 11, 页码: 2102-2106
Authors:
Huang, Xiayuan
;
Zhang, Bo
;
Qiao, Hong
;
Nie, Xiangli
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View/Download:93/0
  |  
Submit date:2018/07/30
Canonical correlation analysis (CCA)
dimensionality reduction (DR)
local discriminant embedding (LDE)
multiview feature extraction
supervised polarimetric synthetic aperture radar (PolSAR) image classification
Robustness properties of dimensionality reduction with Gaussian random matrices
期刊论文
SCIENCE CHINA-MATHEMATICS, 2017, 卷号: 60, 期号: 10, 页码: 1753-1778
Authors:
Han, Bin
;
Xu, ZhiQiang
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View/Download:84/0
  |  
Submit date:2018/07/30
phase retrieval
finite frames
sparse approximation
restricted isometry property
Johnson-Lindenstrauss lemma