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Distributed stochastic gradient tracking methods with momentum acceleration for non-convex optimization 期刊论文
COMPUTATIONAL OPTIMIZATION AND APPLICATIONS, 2022, 页码: 42
Authors:  Gao, Juan;  Liu, Xin-Wei;  Dai, Yu-Hong;  Huang, Yakui;  Gu, Junhua
Favorite  |  View/Download：39/0  |  Submit date：2023/02/07
Distributed non-convex optimization  Machine learning  Momentum methods  Optimization algorithms  Convergence rate  
Monte Carlo fPINNs: Deep learning method for forward and inverse problems involving high dimensional fractional partial differential equations 期刊论文
COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2022, 卷号: 400, 页码: 17
Authors:  Guo, Ling;  Wu, Hao;  Yu, Xiaochen;  Zhou, Tao
Favorite  |  View/Download：17/0  |  Submit date：2023/02/07
Physics -informed neural networks  Fractional Laplacian  Nonlocal operators  Uncertainty quantification  

Normalizing field flows: Solving forward and inverse stochastic differential equations using physics-informed flow models

 期刊论文
JOURNAL OF COMPUTATIONAL PHYSICS, 2022, 卷号: 461, 页码: 18
Authors:  Guo, Ling;  Wu, Hao;  Zhou, Tao
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Data -driven modeling  Normalizing flows  Uncertainty quantification  Random fields  
Prediction of the transcription factor binding sites with meta-learning 期刊论文
METHODS, 2022, 卷号: 203, 页码: 207-213
Authors:  Jing, Fang;  Zhang, Shao-Wu;  Zhang, Shihua
Favorite  |  View/Download：55/0  |  Submit date：2023/02/07
Convolution neural network  Transcription factor binding sites  Meta learning  Noisy labels data  
Deciphering spatial domains from spatially resolved transcriptomics with an adaptive graph attention auto-encoder 期刊论文
NATURE COMMUNICATIONS, 2022, 卷号: 13, 期号: 1, 页码: 12
Authors:  Dong, Kangning;  Zhang, Shihua
Favorite  |  View/Download：68/0  |  Submit date：2022/06/21
Disease category-specific annotation of variants using an ensemble learning framework 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 卷号: 23, 期号: 1, 页码: 15
Authors:  Cao, Zhen;  Huang, Yanting;  Duan, Ran;  Jin, Peng;  Qin, Zhaohui S.;  Zhang, Shihua
Favorite  |  View/Download：67/0  |  Submit date：2022/06/21
complex disease  disease category  functional annotation  non-coding variant  ensemble learning  
Stein variational gradient descent with local approximations 期刊论文
COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2021, 卷号: 386, 页码: 20
Authors:  Yan, Liang;  Zhou, Tao
Favorite  |  View/Download：72/0  |  Submit date：2022/04/02
Stein variational gradient decent  Bayesian inference  Deep learning  Local approximation  
Almost sure convergence of randomised-difference descent algorithm for stochastic convex optimisation 期刊论文
IET CONTROL THEORY AND APPLICATIONS, 2021, 页码: 12
Authors:  Geng, Xiaoxue;  Huang, Gao;  Zhao, Wenxiao
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Bayesian Joint Matrix Decomposition for Data Integration with Heterogeneous Noise 期刊论文
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2021, 卷号: 43, 期号: 4, 页码: 1184-1196
Authors:  Zhang, Chihao;  Zhang, Shihua
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Matrix decomposition  Bayes methods  Data integration  Inference algorithms  Data models  Data mining  Gaussian distribution  Bayesian methods  matrix decomposition  data integration  variational Bayesian inference  maximum a posterior  
An Integrative Framework for Combining Sequence and Epigenomic Data to Predict Transcription Factor Binding Sites Using Deep Learning 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 卷号: 18, 期号: 1, 页码: 355-364
Authors:  Jing, Fang;  Zhang, Shao-Wu;  Cao, Zhen;  Zhang, Shihua
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Bioinformatics  machine learning  transcription factors binding sites  convolutional neural networks  DNA accessibility  histone modification