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Comparative Proteome and Cis-Regulatory Element Analysis Reveals Specific Molecular Pathways Conserved in Dog and Human Brains 期刊论文
MOLECULAR & CELLULAR PROTEOMICS, 2022, 卷号: 21, 期号: 8, 页码: 16
作者:  Hong, Huilin;  Zhao, Zhiguang;  Huang, Xiahe;  Guo, Chao;  Zhao, Hui;  Wang, Guo-Dong;  Zhang, Ya-Ping;  Zhao, Jian-Ping;  Shi, Jianhui;  Wu, Qing-Feng;  Jiang, Yong-Hui;  Wang, Yingchun;  Li, Lei M.;  Du, Zhuo;  Zhang, Yong Q.;  Xiong, Ying
收藏  |  浏览/下载：88/0  |  提交时间：2023/02/07
Prediction of the transcription factor binding sites with meta-learning 期刊论文
METHODS, 2022, 卷号: 203, 页码: 207-213
作者:  Jing, Fang;  Zhang, Shao-Wu;  Zhang, Shihua
收藏  |  浏览/下载：162/0  |  提交时间：2023/02/07
Convolution neural network  Transcription factor binding sites  Meta learning  Noisy labels data  
3Scover: Identifying Safeguard TF from Cell Type-TF Specificity Network by an Extended Minimum Set Cover Model 期刊论文
ISCIENCE, 2020, 卷号: 23, 期号: 6, 页码: 31
作者:  Yuan, Qiuyue;  Wang, Yong
收藏  |  浏览/下载：146/0  |  提交时间：2020/09/23
Simple tricks of convolutional neural network architectures improve DNA-protein binding prediction 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 11, 页码: 1837-1843
作者:  Cao, Zhen;  Zhang, Shihua
收藏  |  浏览/下载：187/0  |  提交时间：2020/01/10
GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes 期刊论文
GENOME RESEARCH, 2019, 卷号: 29, 期号: 4, 页码: 682-696
作者:  Shao, Yi;  Chen, Chunyan;  Shen, Hao;  He, Bin Z.;  Yu, Daqi;  Jiang, Shuai;  Zhao, Shilei;  Gao, Zhiqiang;  Zhu, Zhenglin;  Chen, Xi;  Fu, Yan;  Chen, Hua;  Gao, Ge;  Long, Manyuan;  Zhang, Yong E.
收藏  |  浏览/下载：190/0  |  提交时间：2020/01/10
Drosophila TRF2 and TAF9 regulate lipid droplet size and phospholipid fatty acid composition 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 3, 页码: 21
作者:  Fan, Wei;  Lam, Sin Man;  Xin, Jingxue;  Yang, Xiao;  Liu, Zhonghua;  Liu, Yuan;  Wang, Yong;  Shui, Guanghou;  Huang, Xun
收藏  |  浏览/下载：137/0  |  提交时间：2018/07/30
Sequence-based prediction of protein-protein interactions using weighted sparse representation model combined with global encoding 期刊论文
BMC BIOINFORMATICS, 2016, 卷号: 17, 页码: 11
作者:  Huang, Yu-An;  You, Zhu-Hong;  Chen, Xing;  Chan, Keith;  Luo, Xin
收藏  |  浏览/下载：119/0  |  提交时间：2018/07/30
Discovery of co-occurring driver pathways in cancer 期刊论文
BMC Bioinformatics, 2014, 卷号: 15, 期号: 1
作者:  Zhang,Junhua;  Wu,Ling-Yun;  Zhang,Xiang-Sun;  Zhang,Shihua
收藏  |  浏览/下载：138/0  |  提交时间：2018/07/30
Chemoattraction of macrophages by secretory molecules derived from cells expressing the signal peptide of eosinophil cationic protein 期刊论文
BMC Systems Biology, 2012, 卷号: 6, 期号: 1
作者:  Liu,Yu-Shu;  Tsai,Pei-Wen;  Wang,Yong;  Fan,Tan-chi;  Hsieh,Chia-Hung;  Chang,Margaret Dah-Tsyr;  Pai,Tun-Wen;  Huang,Chien-Fu;  Lan,Chung-Yu;  Chang,Hao-Teng
收藏  |  浏览/下载：148/0  |  提交时间：2018/07/30
Eosinophil cationic protein (ECP)  Signal peptide  Inflammation  Functional linkage network  Cell migration  
Kernel-based data fusion improves the drug-protein interaction prediction 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2011, 卷号: 35, 期号: 6, 页码: 353-362
作者:  Wang, Yong-Cui;  Zhang, Chun-Hua;  Deng, Nai-Yang;  Wang, Yong
收藏  |  浏览/下载：140/0  |  提交时间：2018/07/30
Drug-target interaction  Chemical space  Pharmacological space  Therapeutic space  Genomic space  Kernel function  Support vector machine