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Complexity of the simplest species tree problem 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2021, 卷号: 38, 期号: 9, 页码: 3993-4009
Authors:  Zhu, Tianqi;  Yang, Ziheng
Favorite  |  View/Download:47/0  |  Submit date:2022/04/02
concatenation  efficiency  molecular clock  MSC  multispecies coalescent  species tree  
Markov Jump Processes in Estimating Sharing of Identity by Descent 期刊论文
ACTA MATHEMATICAE APPLICATAE SINICA-ENGLISH SERIES, 2021, 卷号: 37, 期号: 1, 页码: 183-191
Authors:  Chen, Xian;  Guo, Wei;  Ni, Xu-min
Favorite  |  View/Download:90/0  |  Submit date:2021/04/26
IBD sharing  structured coalescent theory  Markov jump process  Kolmogorov backward equation  
AdmixSim: A Forward-Time Simulator for Various Complex Scenarios of Population Admixture 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 5
Authors:  Yang, Xiong;  Yuan, Kai;  Ni, Xumin;  Zhou, Ying;  Guo, Wei;  Xu, Shuhua
Favorite  |  View/Download:58/0  |  Submit date:2021/04/26
simulation  population admixture  genetic ancestry  Wright Fisher model  admixture model  
Truncated tests for combining evidence of summary statistics 期刊论文
GENETIC EPIDEMIOLOGY, 2020, 页码: 15
Authors:  Bu, Deliang;  Yang, Qinglong;  Meng, Zhen;  Zhang, Sanguo;  Li, Qizhai
Favorite  |  View/Download:69/0  |  Submit date:2020/09/23
high-dimensional phenotypes  pleiotropy  summary statistics  truncated test  
Genetic Load and Potential Mutational Meltdown in Cancer Cell Populations 期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2019, 卷号: 36, 期号: 3, 页码: 541-552
Authors:  Zhang, Yuezheng;  Li, Yawei;  Li, Tao;  Shen, Xu;  Zhu, Tianqi;  Tao, Yong;  Li, Xueying;  Wang, Di;  Ma, Qin;  Hu, Zheng;  Liu, Jialin;  Ruan, Jue;  Cai, Jun;  Wang, Hurng-Yi;  Lu, Xuemei
Favorite  |  View/Download:135/0  |  Submit date:2020/01/10
genetic load  Muller's ratchet  HeLa cell line  copy number variation  
MultiWaver 2.0: modeling discrete and continuous gene flow to reconstruct complex population admixtures 期刊论文
EUROPEAN JOURNAL OF HUMAN GENETICS, 2019, 卷号: 27, 期号: 1, 页码: 133-139
Authors:  Ni, Xumin;  Yuan, Kai;  Liu, Chang;  Feng, Qidi;  Tian, Lei;  Ma, Zhiming;  Xu, Shuhua
Favorite  |  View/Download:169/0  |  Submit date:2019/03/05
Inference of multiple-wave admixtures by length distribution of ancestral tracks 期刊论文
HEREDITY, 2018, 卷号: 121, 期号: 1, 页码: 52-63
Authors:  Ni, Xumin;  Yuan, Kai;  Yang, Xiong;  Feng, Qidi;  Guo, Wei;  Ma, Zhiming;  Xu, Shuhua
Favorite  |  View/Download:124/0  |  Submit date:2018/07/30
A Probabilistic Method for Estimating the Sharing of Identity by Descent for Populations with Migration 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2016, 卷号: 13, 期号: 2, 页码: 281-290
Authors:  Ni, Xumin;  Guo, Wei;  Yuan, Kai;  Yang, Xiong;  Ma, Zhiming;  Xu, Shuhua;  Zhang, Shihua
Favorite  |  View/Download:119/0  |  Submit date:2018/07/30
Population genetics  identity by descent  probabilistic method  Markov process  
Statistical measures of genetic differentiation of populations: Rationales, history and current states 期刊论文
Current Zoology, 2015, 卷号: 61, 期号: 5, 页码: 886-897
Authors:  Ma, Liang;  Ji, Ya-Jie;  Zhang, De-Xing
Favorite  |  View/Download:55/0  |  Submit date:2018/07/30
Population structure and subdivision  Coefficient of inbreeding  Fixation index  Gene identity  Gene flow  Non-equilibrium conditions  Heterozygosity  F-ST and selection  
Genome-wide association study identifies a susceptibility locus for schizophrenia in Han Chinese at 11p11.2 期刊论文
NATURE GENETICS, 2011, 卷号: 43, 期号: 12, 页码: 1228-U84
Authors:  Yue, Wei-Hua;  Wang, Hai-Feng;  Sun, Liang-Dan;  Tang, Fu-Lei;  Liu, Zhong-Hua;  Zhang, Hong-Xing;  Li, Wen-Qiang;  Zhang, Yan-Ling;  Zhang, Yang;  Ma, Cui-Cui;  Du, Bo;  Wang, Li-Fang;  Ren, Yun-Qing;  Yang, Yong-Feng;  Hu, Xiao-Feng;  Wang, Yi;  Deng, Wei;  Tan, Li-Wen;  Tan, Yun-Long;  Chen, Qi;  Xu, Guang-Ming;  Yang, Gui-Gang;  Zuo, Xian-bo;  Yan, Hao;  Ruan, Yan-Yan;  Lu, Tian-Lan;  Han, Xue;  Ma, Xiao-Hong;  Wang, Yan;  Cai, Li-Wei;  Jin, Chao;  Zhang, Hong-Yan;  Yan, Jun;  Mi, Wei-Feng;  Yin, Xian-Yong;  Ma, Wen-Bin;  Liu, Qi;  Kang, Lan;  Sun, Wei;  Pan, Cheng-Ying;  Shuang, Mei;  Yang, Fu-De;  Wang, Chuan-Yue;  Yang, Jian-Li;  Li, Ke-Qing;  Ma, Xin;  Li, Ling-Jiang;  Yu, Xin;  Li, Qi-Zhai;  Huang, Xun;  Lv, Lu-Xian;  Li, Tao;  Zhao, Guo-Ping;  Huang, Wei;  Zhang, Xue-Jun;  Zhang, Dai
Favorite  |  View/Download:76/0  |  Submit date:2018/07/30