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BiTSC2: Bayesian inference of tumor clonal tree by joint analysis of single-cell SNV and CNA data 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2022, 页码: 12
Authors:  Chen, Ziwei;  Gong, Fuzhou;  Wan, Lin;  Ma, Liang
Favorite  |  View/Download:4/0  |  Submit date:2022/06/21
single-cell DNA sequencing  intra-tumor heterogeneity  single nucleotide variation  copy number alteration  Bayesian modeling  cancer evolution  
Cross-Network Skip-Gram Embedding for Joint Network Alignment and Link Prediction 期刊论文
IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 2022, 卷号: 34, 期号: 3, 页码: 1080-1095
Authors:  Du, Xingbo;  Yan, Junchi;  Zhang, Rui;  Zha, Hongyuan
Favorite  |  View/Download:23/0  |  Submit date:2022/04/02
Task analysis  Predictive models  Social network services  Peer-to-peer computing  Optimization  Computational modeling  Computer science  Link prediction  network alignment  cross-network embedding  skip-gram  biased random walk  
p A Mixed Wavelet-Learning Method of Predicting Macroscopic Effective Heat Transfer Conductivities of Braided Composite Materials 期刊论文
COMMUNICATIONS IN COMPUTATIONAL PHYSICS, 2022, 卷号: 31, 期号: 2, 页码: 593-625
Authors:  Dong, Hao;  Kou, Wenbo;  Han, Junyan;  Linghu, Jiale;  Zou, Minqiang;  Cui, Junzhi
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Braided composite materials  macroscopic effective heat transfer conductivities  multi-scale modeling  neural networks  wavelet transform  
Parallel exponential time differencing methods for geophysical flow simulations 期刊论文
COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2021, 卷号: 387, 页码: 24
Authors:  Lan, Rihui;  Leng, Wei;  Wang, Zhu;  Ju, Lili;  Gunzburger, Max
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Shallow water equations  Primitive equations  Exponential time differencing  Parallel computing  Barotropic/baroclinic splitting  
Clustering Hidden Markov Models With Variational Bayesian Hierarchical EM 期刊论文
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2021, 页码: 15
Authors:  Lan, Hui;  Liu, Ziquan;  Hsiao, Janet H.;  Yu, Dan;  Chan, Antoni B.
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Hidden Markov models  Bayes methods  Data models  Computational modeling  Mixture models  Clustering algorithms  Analytical models  Clustering  hidden Markov mixture model (H3M)  hierarchical EM  variational Bayesian (VB)  
Online Active Learning for Drifting Data Streams 期刊论文
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2021, 页码: 15
Authors:  Liu, Sanmin;  Xue, Shan;  Wu, Jia;  Zhou, Chuan;  Yang, Jian;  Li, Zhao;  Cao, Jie
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Labeling  Data models  Uncertainty  Biological system modeling  Computational modeling  Cognition  Adaptation models  Active learning  concept drift  data stream classification  online incremental learning  
Determination and estimation of optimal quarantine duration for infectious diseases with application to data analysis of COVID-19 期刊论文
BIOMETRICS, 2021, 页码: 10
Authors:  Wang, Ruoyu;  Wang, Qihua
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incubation period  kernel estimation  maximum likelihood  optimal solution  probability constraint  statistical modeling  
A wavelet-based learning approach assisted multiscale analysis for estimating the effective thermal conductivities of particulate composites 期刊论文
COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING, 2021, 卷号: 374, 页码: 28
Authors:  Dong, Hao;  Nie, Yufeng;  Cui, Junzhi;  Kou, Wenbo;  Zou, Minqiang;  Han, Junyan;  Guan, Xiaofei;  Yang, Zihao
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Particulate composites  Effective thermal conductivities  Multiscale modeling  Artificial neural network  Wavelet transform  
An Integrative Framework for Combining Sequence and Epigenomic Data to Predict Transcription Factor Binding Sites Using Deep Learning 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 卷号: 18, 期号: 1, 页码: 355-364
Authors:  Jing, Fang;  Zhang, Shao-Wu;  Cao, Zhen;  Zhang, Shihua
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Bioinformatics  machine learning  transcription factors binding sites  convolutional neural networks  DNA accessibility  histone modification  
Molecular Sparse Representation by a 3D Ellipsoid Radial Basis Function Neural Network via L1 Regularization 期刊论文
JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2020, 卷号: 60, 期号: 12, 页码: 6054-6064
Authors:  Gui, Sheng;  Chen, Zhaodi;  Lu, Benzhuo;  Chen, Minxin
Favorite  |  View/Download:33/0  |  Submit date:2021/04/26